NucleaRDB: Cross References for VDR_RAT

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This section aims to provide a maximum of database cross-references for each protein. This includes the databases cited in the DR lines of the Swiss-Prot entries but also other data sources and internal pointers. Here you get more details about the different databases that we point to.


Protein Description

 Swiss-Prot
Identifier		 VDR_RAT (P13053)
Description
Vitamin D3 receptor (VDR) (1,25-dihydroxyvitamin D3 receptor)
Gene Vdr;Nr1i1
Organism Rattus norvegicus (Rat)
Chromosomal location 7q36
Gene Ontology QuickGO

Database Cross-References

Local Resources

 NucleaRDB entry : VDR_RAT
NucleaRDB-Family; 1I1 Vitamin D3 (VDR)
NucleaRDB-cDNA; cDNA_1 (pairwise alignment)

Remote Resources

 SWISS-PROT; P13053
EMBL; J04147
Ensembl; J04147
DDBJ; J04147
CoDingSequence; AAA41089.1
SWISS-2DPAGE; P13053
HSSP; HSSP ENTRY: 1kb2
HSSP; SWISS-3DIMAGE: P11473
HSSP; PDB: 1kb2
; P13053
TRANSFAC; T00882
RGD; 3959; Vdr.
GO:0000228; C:nuclear chromosome; TAS.
GO:0003700; F:transcription factor activity; TAS.
GO:0005499; F:vitamin D binding; IMP.
GO:0008434; F:vitamin D3 receptor activity; TAS.
GO:0008628; P:induction of apoptosis by hormones; IDA.
GO:0006357; P:regulation of transcription from Pol II pro...; TAS.
InterPro; IPR000536; Hrmon_recept_lig.
InterPro; IPR001723; Stdhrmn_receptor.
InterPro; IPR008946; Str_ncl_receptor.
InterPro; IPR000324; VitD_receptor.
InterPro; IPR001628; Znf_C4steroid.
InterPro; Graphical view of domain structure.
Pfam; PF00104; Hormone_recep; 1.
Pfam; PF00105; zf-C4; 1.
Pfam; Graphical view of domain structure.
PRINTS; PR00398; STRDHORMONER.
PRINTS; PR00047; STROIDFINGER.
PRINTS; PR00350; VITAMINDR.
ProDom; PD000035; Znf_C4steroid; 1.
PRODOM; P13053; [Domain structure / List of seq.sharing at least 1 domain]
PRODOM:List of seq.sharing at least 1 domain; P13053
SMART; SM00430; HOLI; 1.
SMART; SM00399; ZnF_C4; 1.
PROSITE; PS00031
PROSITE; PS51030
CMR; P13053.
HOVERGEN; P13053; [Family / Alignment / Tree]
BLOCKS; P13053.
ProtoNet; P13053.
ProtoMap; P13053.
PRESAGE; P13053.
ModBase; P13053.
DIP; P13053.
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M.Mokrane, F.Horn (nucleardbcmbi.kun.nl), 20-Apr-2005